BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H04SP1|AL427391
(742 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1654 1392 0.0
>3x_Contig1654
Length = 17174
Score = 1392 bits (690), Expect = 0.0
Identities = 719/740 (97%)
Strand = Plus / Plus
Query: 1 tctcggatagaagttttacaagatgaaaaahaagacctttcccaaaagctgattgatgct 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 7870 tctcggatagaagttttacaagatgaaaaaaaagacctttcccaaaagctgattgatgct 7929
Query: 61 caagctcaaatgcaaatgttggaggctagaacagaagaagatgtcatggaactccgtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7930 caagctcaaatgcaaatgttggaggctagaacagaagaagatgtcatggaactccgtaag 7989
Query: 121 ayattgawaactgctttgcgaaawtcgacatactacatggatgataaccagcttctccaa 180
| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 7990 aaattgaaaactgctttgcgaaaatcgacatactacatggatgataaccagcttctccaa 8049
Query: 181 gaacaactggaagaattggggaacgaccatcatattttacaagatgaaattataawactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 8050 gaacaactggaagaattggggaacgaccatcatattttacaagatgaaattataaaactg 8109
Query: 241 cgggagcacgttaataaattttcagatgcggatwaaggwtcacaacagttaacaattatw 300
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 8110 cgggagcacgttaataaattttcagatgcggataaaggatcacaacagttaacaattata 8169
Query: 301 ahwtctaaactcttggaccatttaagggcaatttttgggtcattcgagaaggttctacaa 360
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8170 aaatctaaactcttggaccatttaagggcaatttttgggtcattcgagaaggttctacaa 8229
Query: 361 ahagagtccattgaccaagcattcaataagttgcataaccttgaacagctagactctgcc 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8230 aaagagtccattgaccaagcattcaataagttgcataaccttgaacagctagactctgcc 8289
Query: 421 aaattcttcaaahagacaattgcyaaattagattcagttttcttttttwttgaatctgcc 480
|||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 8290 aaattcttcaaaaagacaattgcaaaattagattcagttttcttttttattgaatctgcc 8349
Query: 481 atcgaatcaattgtcacagaacatgtcgatctgcttctgaacgawaaagaagaatggtcc 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 8350 atcgaatcaattgtcacagaacatgtcgatctgcttctgaacgaaaaagaagaatggtcc 8409
Query: 541 ggctcatcacagaatgatgaggtagagahacaatccaagctgaaaattgacgaattaagg 600
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 8410 ggctcatcacagaatgatgaggtagagaaacaatccaagctgaaaattgacgaattaagg 8469
Query: 601 aaawthtggattggtgaacgtgaaagawgataactggagtctgaagcagcaacgaaccgc 660
||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 8470 aaaaaatggattggtgaacgtgaaagaagaaaactggagtctgaagcagcaacgaaccgc 8529
Query: 661 atcaatatgttgcaactagagaatcaaaggttgcgagaacaacttggaatccaatgaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8530 atcaatatgttgcaactagagaatcaaaggttgcgagaacaacttggaatccaatgaagg 8589
Query: 721 aattaattagatatatatat 740
||||||||||||||||||||
Sbjct: 8590 aattaattagatatatatat 8609
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5265
Number of Sequences: 1807
Number of extensions: 5265
Number of successful extensions: 116
Number of sequences better than 1.0e-20: 1
length of query: 742
length of database: 10,358,551
effective HSP length: 16
effective length of query: 726
effective length of database: 10,329,639
effective search space: 7499317914
effective search space used: 7499317914
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.4 bits)